153 lines
5.3 KiB
Python
153 lines
5.3 KiB
Python
import numpy as np
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try:
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from scipy.spatial import cKDTree as KDTree
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except Exception:
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try:
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from sklearn.neighbors import NearestNeighbors as SKNearest
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KDTree = None
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except Exception:
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raise ImportError("Requires scipy.spatial.cKDTree or sklearn.neighbors. Install scipy or scikit-learn.")
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def sample_points_from_mesh(vertices: np.ndarray, faces: np.ndarray, n_samples: int) -> np.ndarray:
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"""
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Uniformly sample points on mesh surface.
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vertices: (n,3) array or flattened (n*3,)
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faces: (f,3) array of indices or flattened (f*3,)
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n_samples: number of points to sample
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Returns: (n_samples, 3) sampled points (float32)
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"""
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v = np.asarray(vertices).reshape(-1, 3).astype(np.float64)
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f = np.asarray(faces).reshape(-1, 3).astype(np.int64)
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v0 = v[f[:, 0], :]
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v1 = v[f[:, 1], :]
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v2 = v[f[:, 2], :]
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# triangle areas
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tri_edges = np.cross(v1 - v0, v2 - v0)
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tri_areas = 0.5 * np.linalg.norm(tri_edges, axis=1)
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area_sum = tri_areas.sum()
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if area_sum == 0:
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# Degenerate mesh: return repeated vertices
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idx = np.random.randint(0, v.shape[0], size=n_samples)
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return v[idx].astype(np.float32)
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# probabilities
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probs = tri_areas / area_sum
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# sample triangle indices according to area
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tri_indices = np.random.choice(len(f), size=n_samples, p=probs)
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# sample barycentric coordinates
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r1 = np.sqrt(np.random.rand(n_samples))
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r2 = np.random.rand(n_samples)
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a = 1.0 - r1
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b = r1 * (1.0 - r2)
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c = r1 * r2
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pts = (a[:, None] * v0[tri_indices] +
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b[:, None] * v1[tri_indices] +
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c[:, None] * v2[tri_indices])
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return pts.astype(np.float32)
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def _nn_distances(a_pts: np.ndarray, b_pts: np.ndarray):
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"""
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Compute nearest-neighbor Euclidean distances from each point in a_pts to nearest in b_pts.
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Returns distances (not squared).
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"""
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if a_pts.shape[0] == 0:
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return np.array([], dtype=np.float32)
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if b_pts.shape[0] == 0:
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# return inf
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return np.full((a_pts.shape[0],), np.inf, dtype=np.float32)
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if KDTree is not None:
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tree = KDTree(b_pts)
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dists, _ = tree.query(a_pts, k=1)
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return dists.astype(np.float32)
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else:
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# fallback to sklearn
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nbrs = SKNearest(n_neighbors=1, algorithm='auto').fit(b_pts)
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dists, _ = nbrs.kneighbors(a_pts)
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return dists[:, 0].astype(np.float32)
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def chamfer_distance_from_meshes(pred_vertices: np.ndarray,
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pred_faces: np.ndarray,
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gt_vertices: np.ndarray,
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gt_faces: np.ndarray,
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n_samples: int = 100000,
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return_raw: bool = False):
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"""
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Compute Chamfer distance between predicted mesh and ground-truth mesh.
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pred_vertices/pred_faces: mesh A (prediction)
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gt_vertices/gt_faces: mesh B (ground truth)
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n_samples: number of samples per mesh (default 100k). Lower for speed, e.g. 10k.
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return_raw: if True, also return the sampled point clouds and per-point distances.
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Returns:
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If return_raw is False:
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dict with keys:
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'cd_l2_sq' : bidirectional mean squared L2 (mean of squared distances)
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'cd_l2' : bidirectional mean L2 (mean of distances)
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'A_to_B_l2_sq' : mean squared distances from A->B
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'B_to_A_l2_sq' : mean squared distances from B->A
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'A_to_B_l2' : mean distances A->B
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'B_to_A_l2' : mean distances B->A
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If return_raw is True:
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(metrics_dict, pts_pred, pts_gt, dists_pred_to_gt, dists_gt_to_pred)
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"""
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pts_pred = sample_points_from_mesh(pred_vertices, pred_faces, n_samples)
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pts_gt = sample_points_from_mesh(gt_vertices, gt_faces, n_samples)
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d_pred_to_gt = _nn_distances(pts_pred, pts_gt) # distances from pred samples to nearest gt
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d_gt_to_pred = _nn_distances(pts_gt, pts_pred) # distances from gt samples to nearest pred
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# L2 (distances) and L2^2 (squared)
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A_to_B_l2 = float(np.mean(d_pred_to_gt))
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B_to_A_l2 = float(np.mean(d_gt_to_pred))
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cd_l2 = 0.5 * (A_to_B_l2 + B_to_A_l2)
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A_to_B_l2_sq = float(np.mean(d_pred_to_gt ** 2))
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B_to_A_l2_sq = float(np.mean(d_gt_to_pred ** 2))
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cd_l2_sq = 0.5 * (A_to_B_l2_sq + B_to_A_l2_sq)
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metrics = {
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'cd_l2_sq': cd_l2_sq,
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'cd_l2': cd_l2,
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'A_to_B_l2_sq': A_to_B_l2_sq,
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'B_to_A_l2_sq': B_to_A_l2_sq,
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'A_to_B_l2': A_to_B_l2,
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'B_to_A_l2': B_to_A_l2,
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'n_samples_per_mesh': n_samples,
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}
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if return_raw:
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return metrics, pts_pred, pts_gt, d_pred_to_gt, d_gt_to_pred
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return metrics
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if __name__ == "__main__":
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# Quick example using a simple triangle meshes (triangles)
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# Pred: unit right triangle in XY plane
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pred_verts = np.array([[0, 0, 0],
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[1, 0, 0],
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[0, 1, 0]], dtype=np.float32)
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pred_faces = np.array([[0, 1, 2]], dtype=np.int32)
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# GT: slightly translated triangle
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gt_verts = pred_verts + np.array([0.00, 0.00, 0.5], dtype=np.float32)
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gt_faces = pred_faces.copy()
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metrics = chamfer_distance_from_meshes(pred_verts, pred_faces, gt_verts, gt_faces,
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n_samples=20000)
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print("Chamfer metrics:", metrics)
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