import numpy as np try: from scipy.spatial import cKDTree as KDTree except Exception: try: from sklearn.neighbors import NearestNeighbors as SKNearest KDTree = None except Exception: raise ImportError("Requires scipy.spatial.cKDTree or sklearn.neighbors. Install scipy or scikit-learn.") def sample_points_from_mesh(vertices: np.ndarray, faces: np.ndarray, n_samples: int) -> np.ndarray: """ Uniformly sample points on mesh surface. vertices: (n,3) array or flattened (n*3,) faces: (f,3) array of indices or flattened (f*3,) n_samples: number of points to sample Returns: (n_samples, 3) sampled points (float32) """ v = np.asarray(vertices).reshape(-1, 3).astype(np.float64) f = np.asarray(faces).reshape(-1, 3).astype(np.int64) v0 = v[f[:, 0], :] v1 = v[f[:, 1], :] v2 = v[f[:, 2], :] # triangle areas tri_edges = np.cross(v1 - v0, v2 - v0) tri_areas = 0.5 * np.linalg.norm(tri_edges, axis=1) area_sum = tri_areas.sum() if area_sum == 0: # Degenerate mesh: return repeated vertices idx = np.random.randint(0, v.shape[0], size=n_samples) return v[idx].astype(np.float32) # probabilities probs = tri_areas / area_sum # sample triangle indices according to area tri_indices = np.random.choice(len(f), size=n_samples, p=probs) # sample barycentric coordinates r1 = np.sqrt(np.random.rand(n_samples)) r2 = np.random.rand(n_samples) a = 1.0 - r1 b = r1 * (1.0 - r2) c = r1 * r2 pts = (a[:, None] * v0[tri_indices] + b[:, None] * v1[tri_indices] + c[:, None] * v2[tri_indices]) return pts.astype(np.float32) def _nn_distances(a_pts: np.ndarray, b_pts: np.ndarray): """ Compute nearest-neighbor Euclidean distances from each point in a_pts to nearest in b_pts. Returns distances (not squared). """ if a_pts.shape[0] == 0: return np.array([], dtype=np.float32) if b_pts.shape[0] == 0: # return inf return np.full((a_pts.shape[0],), np.inf, dtype=np.float32) if KDTree is not None: tree = KDTree(b_pts) dists, _ = tree.query(a_pts, k=1) return dists.astype(np.float32) else: # fallback to sklearn nbrs = SKNearest(n_neighbors=1, algorithm='auto').fit(b_pts) dists, _ = nbrs.kneighbors(a_pts) return dists[:, 0].astype(np.float32) def chamfer_distance_from_meshes(pred_vertices: np.ndarray, pred_faces: np.ndarray, gt_vertices: np.ndarray, gt_faces: np.ndarray, n_samples: int = 100000, return_raw: bool = False): """ Compute Chamfer distance between predicted mesh and ground-truth mesh. pred_vertices/pred_faces: mesh A (prediction) gt_vertices/gt_faces: mesh B (ground truth) n_samples: number of samples per mesh (default 100k). Lower for speed, e.g. 10k. return_raw: if True, also return the sampled point clouds and per-point distances. Returns: If return_raw is False: dict with keys: 'cd_l2_sq' : bidirectional mean squared L2 (mean of squared distances) 'cd_l2' : bidirectional mean L2 (mean of distances) 'A_to_B_l2_sq' : mean squared distances from A->B 'B_to_A_l2_sq' : mean squared distances from B->A 'A_to_B_l2' : mean distances A->B 'B_to_A_l2' : mean distances B->A If return_raw is True: (metrics_dict, pts_pred, pts_gt, dists_pred_to_gt, dists_gt_to_pred) """ pts_pred = sample_points_from_mesh(pred_vertices, pred_faces, n_samples) pts_gt = sample_points_from_mesh(gt_vertices, gt_faces, n_samples) d_pred_to_gt = _nn_distances(pts_pred, pts_gt) # distances from pred samples to nearest gt d_gt_to_pred = _nn_distances(pts_gt, pts_pred) # distances from gt samples to nearest pred # L2 (distances) and L2^2 (squared) A_to_B_l2 = float(np.mean(d_pred_to_gt)) B_to_A_l2 = float(np.mean(d_gt_to_pred)) cd_l2 = 0.5 * (A_to_B_l2 + B_to_A_l2) A_to_B_l2_sq = float(np.mean(d_pred_to_gt ** 2)) B_to_A_l2_sq = float(np.mean(d_gt_to_pred ** 2)) cd_l2_sq = 0.5 * (A_to_B_l2_sq + B_to_A_l2_sq) metrics = { 'cd_l2_sq': cd_l2_sq, 'cd_l2': cd_l2, 'A_to_B_l2_sq': A_to_B_l2_sq, 'B_to_A_l2_sq': B_to_A_l2_sq, 'A_to_B_l2': A_to_B_l2, 'B_to_A_l2': B_to_A_l2, 'n_samples_per_mesh': n_samples, } if return_raw: return metrics, pts_pred, pts_gt, d_pred_to_gt, d_gt_to_pred return metrics if __name__ == "__main__": # Quick example using a simple triangle meshes (triangles) # Pred: unit right triangle in XY plane pred_verts = np.array([[0, 0, 0], [1, 0, 0], [0, 1, 0]], dtype=np.float32) pred_faces = np.array([[0, 1, 2]], dtype=np.int32) # GT: slightly translated triangle gt_verts = pred_verts + np.array([0.00, 0.00, 0.5], dtype=np.float32) gt_faces = pred_faces.copy() metrics = chamfer_distance_from_meshes(pred_verts, pred_faces, gt_verts, gt_faces, n_samples=20000) print("Chamfer metrics:", metrics)